Browsing by Author "Phillips, Kyle"

Now showing 1 - 6 of 6
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    Characterisation of a novel soybean candidate glutathione peroxidase/thioredoxin-dependent peroxidase in soybean exposed to osmotic/drought stress
    (University of the Western Cape, 2012) Phillips, Kyle; Ludidi, Ndiko; Keyster, Marshall
    Drought stress is a major contributor to reduced soybean crop yield and quality, this can however be mitigated by the plant’s antioxidant defence mechanisms. One group of antioxidant enzymes that are active in these defence mechanisms are glutathione peroxidases (GPXs). GPXs are antioxidant proteins which are able to reduce H2O2, a toxic reactive oxygen species which accumulates under stress conditions. This study aims at isolating the protein encoded by Glyma01g42840 and determining if it has Phospholipid hydroperoxidase glutathione peroxidase (PHGPX) and/or Thioredoxin dependent peroxidase (TRX-PX) activity as well as assaying the effect of Drought stress on the expression of this putative GPX . This will be accomplished by molecular cloning, sequencing as well as the expression of the isolated protein to assay it enzymatic activity. It was found that the enzyme encoded by Glyma01g42840 is able to use glutathione and thioredoxin as electron donors for the detoxification peroxides, however enzymatic activity is more efficient when using glutathione as an electron donor. In conclusion it was found that glyma01g42840 encodes an enzyme which is able to utilise more than one electron donor and as glutathione produces the greatest amount of enzymatic activity it can be said that glyma01g42840 encodes a GPX.
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    Characterization of the role of Zea mays burp domain-containing genes in maize drought responses
    (University of the Western Cape, 2016) Phillips, Kyle; Ludidi, Ndiko
    Global climate change has resulted in altered rainfall patterns, causing annual losses in maize crop yield due to water deficit stress. Therefore, it is important to produce maize cultivars which are more drought-tolerant. This not an easily accomplished task as plants have a plethora of physical and biochemical adaptation methods. One such mechanism is the drought-induced expression of enzymatic and non-enzymatic proteins which assist plants to resist the effects of water deficit stress. The RD22-like protein subfamily is expressed in response to water deficit stress. Members of the RD22-like subfamily include AtRD22, GmRd22 and BnBDC1 which have been identified in Arabidopsis thaliana, Glycine max and Brassica napus respectively. This study aims at characterising two putative maize RD22-like proteins (designated ZmRd22A and ZmRd22B) by identifying sequence/domain features shared with characterised RD22-like proteins. Semi-quantitative and quantitative PCR techniques were used to examine the spatial and temporal expression patterns of the two putative maize Rd22-like proteins in response to, water deficit stress and exogenously applied abscisic acid in the roots and 2nd youngest leaves of maize seedlings. Using an in silico approach, sequence homology of the two putative maize Rd22- like proteins with AtRD22, GmRD22 and BnBDC1 has been analysed. Online bioinformatic tools were used to compare the characteristics of these Rd22-like proteins with those of the two maize proteins. It was shown that the putative maize RD22-like proteins share domain organisation with the characterised proteins, these common features include a N-terminal hydrophobic signal peptide, followed by a region with a conserved amino acid sequence, a region containing several TxV (x is any amino acid) repeat units and a C-terminal BURP domain-containing the conserved X₅-CH-X₁₀-CH-X₂₃-₂₇-CH-X₂₃-₂₆-CH-X₈-W motif. The putative maize Rd22-like protein appears to be localized in the apoplast, similarly to AtRD22, GmRD22 and BnBDC1. Analysis of the gene's promotor regions reveals cis-acting elements suggestive of induction of gene expression by water deficit stress and abscisic acid (ABA). Semi-quantitative and quantitative real time PCR analysis of the putative maize RD22-like gene revealed that the genes are not expressed in the roots. Exposure to water deficit stress resulted in an increase of ZmRD22A transcript accumulation in the 2nd youngest leaves of maize seedlings. ZmRD22A was shown to be non-responsive to exogenous ABA application. ZmRD22B was highly responsive to exogenous ABA application and responded to water deficit stress to a lesser degree. Transcript accumulation studies in three regions of the 2nd youngest leaves in response to water deficit stress showed that ZmRd22A transcripts accumulate mainly at the base and tips of the leaves. A restricted increase in ZmRD22A transcript accumulation in the middle of the leaves was observed. ZmRD22B showed a similar, but weaker transcript accumulation pattern in response to water deficit stress. However, ZmRD22B showed increased transcript accumulation in the middle region of the leaves. In response to exogenous ABA application, ZmRd22B exhibited high transcript accumulation at the base of the 2nd youngest leaves, with the middle showing higher transcript accumulation than the tip of the leaves. It was concluded that ZmRD22A and ZmRD22B share the domain organisation of characterised RD22-like proteins as well as being responsive to water deficit stress, although only ZmRD22B was shown to be responsive to exogenous ABA application.
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    Drought and exogenous abscisic acid alter hydrogen peroxide accumulation and diferentially regulate the expression of two maize RD22-like genes
    (Nature Research, 2017) Phillips, Kyle; Ludidi, Ndiko
    Increased biosynthesis of abscisic acid (ABA) occurs in plants in response to water defcit, which is mediated by changes in the levels of reactive oxygen species such as H2O2. Water defcit and ABA induce expression of some RD22-like proteins. This study aimed to evaluate the efect of water defcit and exogenous ABA (50µM ABA applied every 24hours for a total of 72hours) on H2O2 content in Zea mays (maize) and to characterise genes encoding two putative maize RD22-like proteins (designated ZmRD22A and ZmRD22B). The expression profles of the two putative maize RD22-like genes in response to water defcit and treatment with ABA were examined in leaves. In silico analyses showed that the maize RD22-like proteins share domain organisation with previously characterized RD22-like proteins. Both water defcit and exogenous ABA resulted in increased H2O2 content in leaves but the increase was more pronounced in response to water defcit than to exogenous ABA. Lignin content was not afected by exogenous ABA, whereas it was decreased by water defcit. Expression of both RD22- like genes was up-regulated by drought but the ZmRD22A gene was not infuenced by exogenous ABA, whereas ZmRD22B was highly responsive to exogenous ABA.
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    Inhibition of NOS- like activity in maize alters the expression of genes involved in H2O2 scavenging and glycine betaine biosynthesis
    (Nature Publishing Group, 2018) Phillips, Kyle; Majola, Anelisa; Gokul, Arun; Keyster, Marshall; Ludidi, Ndiko; Egbichi, Ifeanyi
    Nitric oxide synthase-like activity contributes to the production of nitric oxide in plants, which controls plant responses to stress. This study investigates if changes in ascorbate peroxidase enzymatic activity and glycine betaine content in response to inhibition of nitric oxide synthase-like activity are associated with transcriptional regulation by analyzing transcript levels of genes (betaine aldehyde dehydrogenase) involved in glycine betaine biosynthesis and those encoding antioxidant enzymes (ascorbate peroxidase and catalase) in leaves of maize seedlings treated with an inhibitor of nitric oxide synthase-like activity. In seedlings treated with a nitric oxide synthase inhibitor, transcript levels of betaine aldehyde dehydrogenase were decreased. In plants treated with the nitric oxide synthase inhibitor, the transcript levels of ascorbate peroxidase-encoding genes were down-regulated. We thus conclude that inhibition of nitric oxide synthase-like activity suppresses the expression of ascorbate peroxidase and betaine aldehyde dehydrogenase genes in maize leaves. Furthermore, catalase activity was suppressed in leaves of plants treated with nitric oxide synthase inhibitor; and this corresponded with the suppression of the expression of catalase genes. We further conclude that inhibition of nitric oxide synthase-like activity, which suppresses ascorbate peroxidase and catalase enzymatic activities, results in increased H2O2 content.
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    Involvement of abscisic acid and H2O2 in antioxidant enzyme activities mediated by nitric oxide synthase-like activity in maize
    (University of the Western Cape, 2018) Hlatshwayo, Siphiwe Gift; Ludidi, Ndomelele Ndiko; Phillips, Kyle
    In recent years, nitric oxide (NO) has emerged as an important endogenous plant signalling molecule that mediates many developmental and physiological processes. NO regulates the activity of antioxidant enzymes in response to droughtinduced stress by controlling the expression of the genes that encode these enzymes. Antioxidant enzymes function in scavenging reactive oxygen species like superoxide ion (O2 -) and hydrogen peroxide (H2O2) that are generated in response to drought-induced stress and other abiotic stresses. Abscisic acid, a phytohormone that acts as a stress-related hormone in plants, also stimulates production of H2O2, thus further triggering the antioxidant enzyme activity in order to scavenge the excess H2O2. Accumulated data indicate that NO interacts with reactive oxygen species, notably hydrogen peroxide and superoxide. This study was aimed at clarifying the role of NO derived from nitric oxide synthase-like (NOS-like) enzymatic activity in scavenging of H2O2 and to establish if this is dependent or independent of ABA signaling. This was achieved by using Nω-Nitro-L-Arginine methyl ester (L-NAME), an inhibitor of NOS to control the amount of NO in maize tissue. The study investigated the effect of L-NAME on the accumulation of superoxide, which is scavenged by superoxide dismutase. Furthermore, the study determined the role of NOS-like activity in ABA-mediated production of H2O2. Lastly, the effect of L-NAME on H2O2 accumulation and antioxidant enzyme activity was also investigated. Application of L-NAME altered the enzymatic activity of superoxide dismutase, ascorbate peroxidase and catalase. These changes in enzymatic activity were coupled with altered levels of O2 - and H2O2 in leaves and roots. Treatments with ABA in combination with L-NAME resulted in reversal of H2O2 content to basal levels. These results suggest that nitric oxide, produced by nitric oxide synthase-like activity, is important in regulation of antioxidant enzyme activity and cross-talks with ABA.
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    Water deficit-induced changes in phenolic acid content in maize leaves is associated with altered expression of cinnamate 4-hydroxylase and p-coumaric acid 3-hydroxylase
    (MDPI, 2023) Kolo, Zintle; Majola, Anelisa; Phillips, Kyle
    The amino acid phenylalanine is a precursor to phenolic acids that constitute the lignin biosynthetic pathway. Although there is evidence of a role of some phenolic acids in plant responses to pathogens and salinity, characterization of the involvement of phenolic acids in plant responses to drought is limited. Drought reduces water content in plant tissue and can lead to decreased cell viability and increased cell death. We thus subjected maize seedlings to water deficit and evaluated relative water content and cell viability together with p-coumaric acid, caffeic acid and ferulic acid contents in the leaves. Furthermore, we measured the enzymatic activity of cinnamate 4-hydroxylase (EC 1.14.13.11) and p-coumarate 3-hydroxylase (EC 1.14.17.2) and associated these with the expression of genes encoding cinnamate 4-hydroxylase and p-coumarate-3 hydroxylase in response to water deficit. Water deficit reduced relative water content and cell viability in maize leaves. This corresponded with decreased p-coumaric acid but increased caffeic and ferulic acid content in the leaves. Changes in the phenolic acid content of the maize leaves were associated with increased enzymatic activities of cinnamate 4-hydroxylase and p-coumarate hydroxylase. The increased enzymatic activity of p-coumarate 3-hydroxylase was associated with increased expression of a gene encoding p-coumarate 3-hydroxylase. We thus conclude that metabolic pathways involving phenolic acids may contribute to the regulation of drought responses in maize, and we propose that further work to elucidate this regulation may contribute to the development of new maize varieties with improved drought tolerance. This can be achieved by marker-assisted selection to select maize lines with high levels of expression of genes encoding cinnamate 4-hydroxylase and/or p-coumarate 3-hydroxylase for use in breeding programs aimed and improving drought tolerance, or by overexpression of these genes via genetic engineering to confer drought tolerance.